MetamORF
MetamORF: A repository of unique short Open Reading Frames identified by both experimental and computational approaches for gene-level and meta-analysis
Description
MetamORF is a repository of unique short open reading frames (sORFs) identified in the human and mouse genomes with both experimental and computational approaches. It has been built by gathering publicly available sORF data, normalizing them and summarizing redundant information. The data has been inserted, reprocessed and homogenized in order to allow comparison of sORFs from distinct original data sources. MetamORF enables analysis at both ORF, transcript and gene levels, which should help addressing new questions regarding sORF functions in the future. Please see the description of my PhD project as well as MetamORF publication and website for more details about this work.
Labs involved
- Theories and Avances for the Genome Complexity (TAGC), Turing Centre for Living Systems, Aix-Marseille Université
- Centre of Immunology of Marseille Luminy (CIML), Turing Centre for Living Systems, Aix-Marseille Université
Publications
- Choteau SA, Wagner A, Pierre P, Spinelli L, Brun C (2021). MetamORF: A repository of unique short Open Reading Frames identified by both experimental and computational approaches for gene-level and meta-analysis (2021). Database, Under review.
Close collaborators
- Christine Brun (TAGC)
- Philippe Pierre (CIML)
- Lionel Spinelli (TAGC, CIML)
- Audrey Wagner (TAGC)
- Andreas Zanzoni (TAGC)